<?xml version="1.0" encoding="ascii"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
          "DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head>
  <title>Priithon.readerSIF</title>
  <link rel="stylesheet" href="epydoc.css" type="text/css" />
  <script type="text/javascript" src="epydoc.js"></script>
</head>

<body bgcolor="white" text="black" link="blue" vlink="#204080"
      alink="#204080">
<!-- ==================== NAVIGATION BAR ==================== -->
<table class="navbar" border="0" width="100%" cellpadding="0"
       bgcolor="#a0c0ff" cellspacing="0">
  <tr valign="middle">
  <!-- Home link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="Priithon-module.html">Home</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Tree link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="module-tree.html">Trees</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Index link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="identifier-index.html">Indices</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Help link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="help.html">Help</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Project homepage -->
      <th class="navbar" align="right" width="100%">
        <table border="0" cellpadding="0" cellspacing="0">
          <tr><th class="navbar" align="center"
            ><a class="navbar" target="_top" href="http://code.google.com/p/priithon">Priithon</a></th>
          </tr></table></th>
  </tr>
</table>
<table width="100%" cellpadding="0" cellspacing="0">
  <tr valign="top">
    <td width="100%">
      <span class="breadcrumbs">
        <a href="Priithon-module.html">Package&nbsp;Priithon</a> ::
        Module&nbsp;readerSIF
      </span>
    </td>
    <td>
      <table cellpadding="0" cellspacing="0">
        <!-- hide/show private -->
        <tr><td align="right"><span class="options">[<a href="javascript:void(0);" class="privatelink"
    onclick="toggle_private();">hide&nbsp;private</a>]</span></td></tr>
        <tr><td align="right"><span class="options"
            >[<a href="frames.html" target="_top">frames</a
            >]&nbsp;|&nbsp;<a href="Priithon.readerSIF-pysrc.html"
            target="_top">no&nbsp;frames</a>]</span></td></tr>
      </table>
    </td>
  </tr>
</table>
<h1 class="epydoc">Source Code for <a href="Priithon.readerSIF-module.html">Module Priithon.readerSIF</a></h1>
<pre class="py-src">
<a name="L1"></a><tt class="py-lineno">  1</tt>  <tt class="py-line"><tt class="py-docstring">"""</tt> </tt>
<a name="L2"></a><tt class="py-lineno">  2</tt>  <tt class="py-line"><tt class="py-docstring">Priithon: reader for Andor SIF files</tt> </tt>
<a name="L3"></a><tt class="py-lineno">  3</tt>  <tt class="py-line"><tt class="py-docstring">"""</tt> </tt>
<a name="L4"></a><tt class="py-lineno">  4</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">__future__</tt> <tt class="py-keyword">import</tt> <tt class="py-name">absolute_import</tt> </tt>
<a name="L5"></a><tt class="py-lineno">  5</tt>  <tt class="py-line"> </tt>
<a name="L6"></a><tt class="py-lineno">  6</tt>  <tt class="py-line"><tt class="py-name">__author__</tt>  <tt class="py-op">=</tt> <tt class="py-string">"Sebastian Haase &lt;seb.haase+Priithon@gmail.com&gt;"</tt> </tt>
<a name="L7"></a><tt class="py-lineno">  7</tt>  <tt class="py-line"><tt id="link-0" class="py-name" targets="Variable Priithon.PriShell.__license__=Priithon.PriShell-module.html#__license__,Variable Priithon.__license__=Priithon-module.html#__license__"><a title="Priithon.PriShell.__license__
Priithon.__license__" class="py-name" href="#" onclick="return doclink('link-0', '__license__', 'link-0');">__license__</a></tt> <tt class="py-op">=</tt> <tt class="py-string">"BSD license - see LICENSE file"</tt> </tt>
<a name="L8"></a><tt class="py-lineno">  8</tt>  <tt class="py-line"> </tt>
<a name="L9"></a><tt class="py-lineno">  9</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">numpy</tt> <tt class="py-keyword">as</tt> <tt class="py-name">N</tt> </tt>
<a name="L10"></a><tt class="py-lineno"> 10</tt>  <tt class="py-line"> </tt>
<a name="ndarray_inAndorSifFile"></a><div id="ndarray_inAndorSifFile-def"><a name="L11"></a><tt class="py-lineno"> 11</tt> <a class="py-toggle" href="#" id="ndarray_inAndorSifFile-toggle" onclick="return toggle('ndarray_inAndorSifFile');">-</a><tt class="py-line"><tt class="py-keyword">class</tt> <a class="py-def-name" href="Priithon.readerSIF.ndarray_inAndorSifFile-class.html">ndarray_inAndorSifFile</a><tt class="py-op">(</tt><tt class="py-base-class">N</tt><tt class="py-op">.</tt><tt class="py-base-class">ndarray</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="ndarray_inAndorSifFile-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="ndarray_inAndorSifFile-expanded"><a name="ndarray_inAndorSifFile.__new__"></a><div id="ndarray_inAndorSifFile.__new__-def"><a name="L12"></a><tt class="py-lineno"> 12</tt> <a class="py-toggle" href="#" id="ndarray_inAndorSifFile.__new__-toggle" onclick="return toggle('ndarray_inAndorSifFile.__new__');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.readerSIF.ndarray_inAndorSifFile-class.html#__new__">__new__</a><tt class="py-op">(</tt><tt class="py-param">cls</tt><tt class="py-op">,</tt> <tt class="py-param">input_array</tt><tt class="py-op">,</tt> <tt class="py-param">andorSifInfo</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="ndarray_inAndorSifFile.__new__-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="ndarray_inAndorSifFile.__new__-expanded"><a name="L13"></a><tt class="py-lineno"> 13</tt>  <tt class="py-line">        <tt class="py-name">obj</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asanyarray</tt><tt class="py-op">(</tt><tt class="py-name">input_array</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-1" class="py-name" targets="Method Priithon.mockNDarray.mockNDarray.view()=Priithon.mockNDarray.mockNDarray-class.html#view,Function Priithon.viewer.view()=Priithon.viewer-module.html#view,Function Priithon.viewer2.view()=Priithon.viewer2-module.html#view"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-1', 'view', 'link-1');">view</a></tt><tt class="py-op">(</tt><tt class="py-name">cls</tt><tt class="py-op">)</tt> </tt>
<a name="L14"></a><tt class="py-lineno"> 14</tt>  <tt class="py-line">        <tt class="py-name">obj</tt><tt class="py-op">.</tt><tt class="py-name">AndorSIF</tt> <tt class="py-op">=</tt> <tt class="py-name">mrcInfo</tt> </tt>
<a name="L15"></a><tt class="py-lineno"> 15</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">obj</tt> </tt>
</div><a name="L16"></a><tt class="py-lineno"> 16</tt>  <tt class="py-line"> </tt>
<a name="ndarray_inAndorSifFile.__array_finalize__"></a><div id="ndarray_inAndorSifFile.__array_finalize__-def"><a name="L17"></a><tt class="py-lineno"> 17</tt> <a class="py-toggle" href="#" id="ndarray_inAndorSifFile.__array_finalize__-toggle" onclick="return toggle('ndarray_inAndorSifFile.__array_finalize__');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.readerSIF.ndarray_inAndorSifFile-class.html#__array_finalize__">__array_finalize__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">obj</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="ndarray_inAndorSifFile.__array_finalize__-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="ndarray_inAndorSifFile.__array_finalize__-expanded"><a name="L18"></a><tt class="py-lineno"> 18</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">obj</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> </tt>
<a name="L19"></a><tt class="py-lineno"> 19</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">AndorSIF</tt> <tt class="py-op">=</tt> <tt class="py-name">getattr</tt><tt class="py-op">(</tt><tt class="py-name">obj</tt><tt class="py-op">,</tt> <tt class="py-string">'AndorSIF'</tt><tt class="py-op">,</tt> <tt class="py-name">None</tt><tt class="py-op">)</tt> </tt>
<a name="L20"></a><tt class="py-lineno"> 20</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">.</tt><tt id="link-2" class="py-name" targets="Method Priithon.plt.wxplt.plot_canvas.update()=Priithon.plt.wxplt.plot_canvas-class.html#update,Method Priithon.plt.wxplt.plot_frame.update()=Priithon.plt.wxplt.plot_frame-class.html#update"><a title="Priithon.plt.wxplt.plot_canvas.update
Priithon.plt.wxplt.plot_frame.update" class="py-name" href="#" onclick="return doclink('link-2', 'update', 'link-2');">update</a></tt><tt class="py-op">(</tt><tt class="py-name">getattr</tt><tt class="py-op">(</tt><tt class="py-name">obj</tt><tt class="py-op">,</tt> <tt class="py-string">"__dict__"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div></div><a name="L21"></a><tt class="py-lineno"> 21</tt>  <tt class="py-line"> </tt>
<a name="_data_withAndorSIF"></a><div id="_data_withAndorSIF-def"><a name="L22"></a><tt class="py-lineno"> 22</tt> <a class="py-toggle" href="#" id="_data_withAndorSIF-toggle" onclick="return toggle('_data_withAndorSIF');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.readerSIF-module.html#_data_withAndorSIF">_data_withAndorSIF</a><tt class="py-op">(</tt><tt class="py-param">info</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_data_withAndorSIF-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="_data_withAndorSIF-expanded"><a name="L23"></a><tt class="py-lineno"> 23</tt>  <tt class="py-line">    <tt class="py-docstring">"""use this to get 'spiffed up' array"""</tt> </tt>
<a name="L24"></a><tt class="py-lineno"> 24</tt>  <tt class="py-line"> </tt>
<a name="L25"></a><tt class="py-lineno"> 25</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">weakref</tt> </tt>
<a name="L26"></a><tt class="py-lineno"> 26</tt>  <tt class="py-line">    <tt class="py-string">'''</tt> </tt>
<a name="L27"></a><tt class="py-lineno"> 27</tt>  <tt class="py-line"><tt class="py-string">    #NOT-WORKING:  self.data.Mrc = weakref.proxy( self )</tt> </tt>
<a name="L28"></a><tt class="py-lineno"> 28</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L29"></a><tt class="py-lineno"> 29</tt>  <tt class="py-line"><tt class="py-string">    #20071123: http://www.scipy.org/Subclasses</tt> </tt>
<a name="L30"></a><tt class="py-lineno"> 30</tt>  <tt class="py-line"><tt class="py-string">    class ndarray_inSIFfile(N.ndarray):</tt> </tt>
<a name="L31"></a><tt class="py-lineno"> 31</tt>  <tt class="py-line"><tt class="py-string">        def __array_finalize__(self,obj):</tt> </tt>
<a name="L32"></a><tt class="py-lineno"> 32</tt>  <tt class="py-line"><tt class="py-string">            self.AndorSIF = getattr(obj, 'AndorSIF', None)</tt> </tt>
<a name="L33"></a><tt class="py-lineno"> 33</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L34"></a><tt class="py-lineno"> 34</tt>  <tt class="py-line"><tt class="py-string">    data = info.imageData</tt> </tt>
<a name="L35"></a><tt class="py-lineno"> 35</tt>  <tt class="py-line"><tt class="py-string">    data.__class__ = ndarray_inSIFfile</tt> </tt>
<a name="L36"></a><tt class="py-lineno"> 36</tt>  <tt class="py-line"><tt class="py-string">    ddd = weakref.proxy( data )</tt> </tt>
<a name="L37"></a><tt class="py-lineno"> 37</tt>  <tt class="py-line"><tt class="py-string">    info.imageData = ddd</tt> </tt>
<a name="L38"></a><tt class="py-lineno"> 38</tt>  <tt class="py-line"><tt class="py-string">    data.AndorSIF = info</tt> </tt>
<a name="L39"></a><tt class="py-lineno"> 39</tt>  <tt class="py-line"><tt class="py-string">    '''</tt> </tt>
<a name="L40"></a><tt class="py-lineno"> 40</tt>  <tt class="py-line">    <tt id="link-3" class="py-name" targets="Variable Priithon.viewerRubberbandMode.viewerRubberbandMode.data=Priithon.viewerRubberbandMode.viewerRubberbandMode-class.html#data"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-3', 'data', 'link-3');">data</a></tt> <tt class="py-op">=</tt> <tt id="link-4" class="py-name" targets="Class Priithon.readerSIF.ndarray_inAndorSifFile=Priithon.readerSIF.ndarray_inAndorSifFile-class.html"><a title="Priithon.readerSIF.ndarray_inAndorSifFile" class="py-name" href="#" onclick="return doclink('link-4', 'ndarray_inAndorSifFile', 'link-4');">ndarray_inAndorSifFile</a></tt><tt class="py-op">(</tt><tt id="link-5" class="py-name" targets="Method Priithon.Mrc.Mrc.info()=Priithon.Mrc.Mrc-class.html#info,Method Priithon.Mrc.Mrc2.info()=Priithon.Mrc.Mrc2-class.html#info"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-5', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt><tt class="py-op">,</tt> <tt id="link-6" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-6', 'info', 'link-5');">info</a></tt><tt class="py-op">)</tt> </tt>
<a name="L41"></a><tt class="py-lineno"> 41</tt>  <tt class="py-line">    <tt id="link-7" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-7', 'data', 'link-3');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">AndorSIF</tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt> <tt class="py-op">=</tt> <tt class="py-name">weakref</tt><tt class="py-op">.</tt><tt class="py-name">proxy</tt><tt class="py-op">(</tt> <tt id="link-8" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-8', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt> <tt class="py-op">)</tt> <tt class="py-comment"># remove circular reference</tt> </tt>
<a name="L42"></a><tt class="py-lineno"> 42</tt>  <tt class="py-line"> </tt>
<a name="L43"></a><tt class="py-lineno"> 43</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-9" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-9', 'data', 'link-3');">data</a></tt> </tt>
</div><a name="L44"></a><tt class="py-lineno"> 44</tt>  <tt class="py-line"> </tt>
<a name="L45"></a><tt class="py-lineno"> 45</tt>  <tt class="py-line"> </tt>
<a name="readSIF"></a><div id="readSIF-def"><a name="L46"></a><tt class="py-lineno"> 46</tt> <a class="py-toggle" href="#" id="readSIF-toggle" onclick="return toggle('readSIF');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.readerSIF-module.html#readSIF">readSIF</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">read_Back_ref</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="readSIF-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="readSIF-expanded"><a name="L47"></a><tt class="py-lineno"> 47</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L48"></a><tt class="py-lineno"> 48</tt>  <tt class="py-line"><tt class="py-docstring">    TODO FIXME -- only read_Back_ref=0 supported</tt> </tt>
<a name="L49"></a><tt class="py-lineno"> 49</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L50"></a><tt class="py-lineno"> 50</tt>  <tt class="py-line"><tt class="py-docstring">    if read_Back_ref </tt> </tt>
<a name="L51"></a><tt class="py-lineno"> 51</tt>  <tt class="py-line"><tt class="py-docstring">      == 0: read only data</tt> </tt>
<a name="L52"></a><tt class="py-lineno"> 52</tt>  <tt class="py-line"><tt class="py-docstring">      == 1: read data + back</tt> </tt>
<a name="L53"></a><tt class="py-lineno"> 53</tt>  <tt class="py-line"><tt class="py-docstring">      == 2: read data + back + ref</tt> </tt>
<a name="L54"></a><tt class="py-lineno"> 54</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L55"></a><tt class="py-lineno"> 55</tt>  <tt class="py-line"><tt class="py-docstring">    #old:returns tuple if read_Back_ref &gt;0</tt> </tt>
<a name="L56"></a><tt class="py-lineno"> 56</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L57"></a><tt class="py-lineno"> 57</tt>  <tt class="py-line"><tt class="py-docstring">    return memmapped ndarray with "special AndorSIF" attribute</tt> </tt>
<a name="L58"></a><tt class="py-lineno"> 58</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L59"></a><tt class="py-lineno"> 59</tt>  <tt class="py-line"><tt class="py-docstring">    %  [data,back,ref]=sifread(file)</tt> </tt>
<a name="L60"></a><tt class="py-lineno"> 60</tt>  <tt class="py-line"><tt class="py-docstring">    %     Read the image data, background and reference from file.</tt> </tt>
<a name="L61"></a><tt class="py-lineno"> 61</tt>  <tt class="py-line"><tt class="py-docstring">    %     Return the image data, background and reference in named</tt> </tt>
<a name="L62"></a><tt class="py-lineno"> 62</tt>  <tt class="py-line"><tt class="py-docstring">    %     structures as follows:</tt> </tt>
<a name="L63"></a><tt class="py-lineno"> 63</tt>  <tt class="py-line"><tt class="py-docstring">    %</tt> </tt>
<a name="L64"></a><tt class="py-lineno"> 64</tt>  <tt class="py-line"><tt class="py-docstring">    %  .temperature            CCD temperature [#C]</tt> </tt>
<a name="L65"></a><tt class="py-lineno"> 65</tt>  <tt class="py-line"><tt class="py-docstring">    %  .exposureTime           Exposure time [s]</tt> </tt>
<a name="L66"></a><tt class="py-lineno"> 66</tt>  <tt class="py-line"><tt class="py-docstring">    %  .cycleTime              Time per full image take [s]</tt> </tt>
<a name="L67"></a><tt class="py-lineno"> 67</tt>  <tt class="py-line"><tt class="py-docstring">    %  .accumulateCycles       Number of accumulation cycles</tt> </tt>
<a name="L68"></a><tt class="py-lineno"> 68</tt>  <tt class="py-line"><tt class="py-docstring">    %  .accumulateCycleTime    Time per accumulated image [s]</tt> </tt>
<a name="L69"></a><tt class="py-lineno"> 69</tt>  <tt class="py-line"><tt class="py-docstring">    %  .stackCycleTime         Interval in image series [s]</tt> </tt>
<a name="L70"></a><tt class="py-lineno"> 70</tt>  <tt class="py-line"><tt class="py-docstring">    %  .pixelReadoutTime       Time per pixel readout [s]</tt> </tt>
<a name="L71"></a><tt class="py-lineno"> 71</tt>  <tt class="py-line"><tt class="py-docstring">    %  .detectorType           CCD type</tt> </tt>
<a name="L72"></a><tt class="py-lineno"> 72</tt>  <tt class="py-line"><tt class="py-docstring">    %  .detectorSize           Number of read CCD pixels [x,y]</tt> </tt>
<a name="L73"></a><tt class="py-lineno"> 73</tt>  <tt class="py-line"><tt class="py-docstring">    %  .fileName               Original file name</tt> </tt>
<a name="L74"></a><tt class="py-lineno"> 74</tt>  <tt class="py-line"><tt class="py-docstring">    %  .shutterTime            Time to open/close the shutter [s]</tt> </tt>
<a name="L75"></a><tt class="py-lineno"> 75</tt>  <tt class="py-line"><tt class="py-docstring">    %  .frameAxis              Axis unit of CCD frame</tt> </tt>
<a name="L76"></a><tt class="py-lineno"> 76</tt>  <tt class="py-line"><tt class="py-docstring">    %  .dataType               Type of image data</tt> </tt>
<a name="L77"></a><tt class="py-lineno"> 77</tt>  <tt class="py-line"><tt class="py-docstring">    %  .imageAxis              Axis unit of image</tt> </tt>
<a name="L78"></a><tt class="py-lineno"> 78</tt>  <tt class="py-line"><tt class="py-docstring">    %  .imageArea              Image limits [x1,y1,first image;</tt> </tt>
<a name="L79"></a><tt class="py-lineno"> 79</tt>  <tt class="py-line"><tt class="py-docstring">    %                                        x2,y2,last image]</tt> </tt>
<a name="L80"></a><tt class="py-lineno"> 80</tt>  <tt class="py-line"><tt class="py-docstring">    %  .frameArea              Frame limits [x1,y1;x2,y2]</tt> </tt>
<a name="L81"></a><tt class="py-lineno"> 81</tt>  <tt class="py-line"><tt class="py-docstring">    %  .frameBins              Binned pixels [x,y]</tt> </tt>
<a name="L82"></a><tt class="py-lineno"> 82</tt>  <tt class="py-line"><tt class="py-docstring">    %  .timeStamp              Time stamp in image series</tt> </tt>
<a name="L83"></a><tt class="py-lineno"> 83</tt>  <tt class="py-line"><tt class="py-docstring">    %  .imageData              Image data (x,y,t)</tt> </tt>
<a name="L84"></a><tt class="py-lineno"> 84</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L85"></a><tt class="py-lineno"> 85</tt>  <tt class="py-line"><tt class="py-docstring">    translated from matlab sifread.m  by Marcel Leutenegger (c) November 2006</tt> </tt>
<a name="L86"></a><tt class="py-lineno"> 86</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L87"></a><tt class="py-lineno"> 87</tt>  <tt class="py-line">    <tt class="py-name">f</tt> <tt class="py-op">=</tt> <tt id="link-10" class="py-name" targets="Function Priithon.Mrc.open()=Priithon.Mrc-module.html#open,Function Priithon.plt.dumb_shelve.open()=Priithon.plt.dumb_shelve-module.html#open,Function Priithon.plt.dumbdbm_patched.open()=Priithon.plt.dumbdbm_patched-module.html#open,Method Priithon.py.buffer.Buffer.open()=Priithon.py.buffer.Buffer-class.html#open"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-10', 'open', 'link-10');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-string">"rb"</tt><tt class="py-op">)</tt> </tt>
<a name="L88"></a><tt class="py-lineno"> 88</tt>  <tt class="py-line">    <tt class="py-name">l</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-11" class="py-name" targets="Method Priithon.Scientific_IO_TextFile.TextFile.readline()=Priithon.Scientific_IO_TextFile.TextFile-class.html#readline,Method Priithon.py.pseudo.PseudoFile.readline()=Priithon.py.pseudo.PseudoFile-class.html#readline,Method Priithon.py.shell.Shell.readline()=Priithon.py.shell.Shell-class.html#readline"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-11', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L89"></a><tt class="py-lineno"> 89</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">l</tt> <tt class="py-op">!=</tt> <tt class="py-string">'Andor Technology Multi-Channel File'</tt><tt class="py-op">:</tt> </tt>
<a name="L90"></a><tt class="py-lineno"> 90</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">IOError</tt><tt class="py-op">,</tt> <tt class="py-string">'Not an Andor SIF image file.'</tt> </tt>
<a name="L91"></a><tt class="py-lineno"> 91</tt>  <tt class="py-line"> </tt>
<a name="L92"></a><tt class="py-lineno"> 92</tt>  <tt class="py-line">    <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-12" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-12', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment">#skipLine # 65538 1</tt> </tt>
<a name="L93"></a><tt class="py-lineno"> 93</tt>  <tt class="py-line"> </tt>
<a name="L94"></a><tt class="py-lineno"> 94</tt>  <tt class="py-line">    <tt id="link-13" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-13', 'data', 'link-3');">data</a></tt><tt class="py-op">,</tt><tt class="py-name">next</tt> <tt class="py-op">=</tt> <tt id="link-14" class="py-name" targets="Function Priithon.readerHIS.readSection()=Priithon.readerHIS-module.html#readSection,Function Priithon.readerSIF.readSection()=Priithon.readerSIF-module.html#readSection"><a title="Priithon.readerHIS.readSection
Priithon.readerSIF.readSection" class="py-name" href="#" onclick="return doclink('link-14', 'readSection', 'link-14');">readSection</a></tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">)</tt> </tt>
<a name="L95"></a><tt class="py-lineno"> 95</tt>  <tt class="py-line"> </tt>
<a name="L96"></a><tt class="py-lineno"> 96</tt>  <tt class="py-line"> </tt>
<a name="L97"></a><tt class="py-lineno"> 97</tt>  <tt class="py-line">    <tt class="py-comment">#fix postponed image data -- use memmap</tt> </tt>
<a name="L98"></a><tt class="py-lineno"> 98</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">qm</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">memmap</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">mode</tt><tt class="py-op">=</tt><tt class="py-string">'r'</tt><tt class="py-op">)</tt> </tt>
<a name="L99"></a><tt class="py-lineno"> 99</tt>  <tt class="py-line">    <tt class="py-name">md</tt> <tt class="py-op">=</tt> <tt class="py-name">qm</tt><tt class="py-op">[</tt><tt id="link-15" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-15', 'data', 'link-3');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">:</tt><tt id="link-16" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-16', 'data', 'link-3');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-number">4</tt><tt class="py-op">*</tt><tt id="link-17" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-17', 'data', 'link-3');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> </tt>
<a name="L100"></a><tt class="py-lineno">100</tt>  <tt class="py-line">    <tt class="py-name">q</tt> <tt class="py-op">=</tt> <tt class="py-name">md</tt><tt class="py-op">.</tt><tt id="link-18" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-18', 'view', 'link-1');">view</a></tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">single</tt><tt class="py-op">)</tt> </tt>
<a name="L101"></a><tt class="py-lineno">101</tt>  <tt class="py-line">    <tt class="py-name">q</tt><tt class="py-op">.</tt><tt id="link-19" class="py-name" targets="Variable Priithon.mockNDarray.mockNDarray.shape=Priithon.mockNDarray.mockNDarray-class.html#shape"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-19', 'shape', 'link-19');">shape</a></tt> <tt class="py-op">=</tt> <tt id="link-20" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-20', 'data', 'link-3');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> </tt>
<a name="L102"></a><tt class="py-lineno">102</tt>  <tt class="py-line">    <tt id="link-21" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-21', 'data', 'link-3');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt> <tt class="py-op">=</tt> <tt class="py-name">q</tt> </tt>
<a name="L103"></a><tt class="py-lineno">103</tt>  <tt class="py-line"> </tt>
<a name="L104"></a><tt class="py-lineno">104</tt>  <tt class="py-line">    <tt class="py-comment"># FIXME TO read</tt> </tt>
<a name="L105"></a><tt class="py-lineno">105</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-string">'''</tt> </tt>
<a name="L106"></a><tt class="py-lineno">106</tt>  <tt class="py-line"><tt class="py-string">    if next and read_Back_ref&gt;0:</tt> </tt>
<a name="L107"></a><tt class="py-lineno">107</tt>  <tt class="py-line"><tt class="py-string">        back,next = readSection(f)</tt> </tt>
<a name="L108"></a><tt class="py-lineno">108</tt>  <tt class="py-line"><tt class="py-string">        if next and read_Back_ref&gt;1:</tt> </tt>
<a name="L109"></a><tt class="py-lineno">109</tt>  <tt class="py-line"><tt class="py-string">            ref,next = readSection(f)</tt> </tt>
<a name="L110"></a><tt class="py-lineno">110</tt>  <tt class="py-line"><tt class="py-string">            return data,back,ref</tt> </tt>
<a name="L111"></a><tt class="py-lineno">111</tt>  <tt class="py-line"><tt class="py-string">        else:</tt> </tt>
<a name="L112"></a><tt class="py-lineno">112</tt>  <tt class="py-line"><tt class="py-string">            return data,back            </tt> </tt>
<a name="L113"></a><tt class="py-lineno">113</tt>  <tt class="py-line"><tt class="py-string">    else:</tt> </tt>
<a name="L114"></a><tt class="py-lineno">114</tt>  <tt class="py-line"><tt class="py-string">        return data</tt> </tt>
<a name="L115"></a><tt class="py-lineno">115</tt>  <tt class="py-line"><tt class="py-string">    '''</tt> </tt>
<a name="L116"></a><tt class="py-lineno">116</tt>  <tt class="py-line"> </tt>
<a name="L117"></a><tt class="py-lineno">117</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-22" class="py-name" targets="Function Priithon.readerSIF._data_withAndorSIF()=Priithon.readerSIF-module.html#_data_withAndorSIF"><a title="Priithon.readerSIF._data_withAndorSIF" class="py-name" href="#" onclick="return doclink('link-22', '_data_withAndorSIF', 'link-22');">_data_withAndorSIF</a></tt><tt class="py-op">(</tt><tt id="link-23" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-23', 'data', 'link-3');">data</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L118"></a><tt class="py-lineno">118</tt>  <tt class="py-line"> </tt>
<a name="L119"></a><tt class="py-lineno">119</tt>  <tt class="py-line"> </tt>
<a name="readSection"></a><div id="readSection-def"><a name="L120"></a><tt class="py-lineno">120</tt> <a class="py-toggle" href="#" id="readSection-toggle" onclick="return toggle('readSection');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.readerSIF-module.html#readSection">readSection</a><tt class="py-op">(</tt><tt class="py-param">f</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="readSection-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="readSection-expanded"><a name="L121"></a><tt class="py-lineno">121</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L122"></a><tt class="py-lineno">122</tt>  <tt class="py-line"><tt class="py-docstring">    % f      File handle</tt> </tt>
<a name="L123"></a><tt class="py-lineno">123</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L124"></a><tt class="py-lineno">124</tt>  <tt class="py-line"><tt class="py-docstring">    returns</tt> </tt>
<a name="L125"></a><tt class="py-lineno">125</tt>  <tt class="py-line"><tt class="py-docstring">    % info   Section data</tt> </tt>
<a name="L126"></a><tt class="py-lineno">126</tt>  <tt class="py-line"><tt class="py-docstring">    % next   Flags if another section is available</tt> </tt>
<a name="L127"></a><tt class="py-lineno">127</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L128"></a><tt class="py-lineno">128</tt>  <tt class="py-line">    <tt class="py-keyword">class</tt> <tt class="py-def-name">_info</tt><tt class="py-op">:</tt> </tt>
<a name="L129"></a><tt class="py-lineno">129</tt>  <tt class="py-line">        <tt class="py-keyword">def</tt> <tt class="py-def-name">__getitem__</tt><tt class="py-op">(</tt><tt class="py-param">s</tt><tt class="py-op">,</tt> <tt class="py-param">k</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L130"></a><tt class="py-lineno">130</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">__get_attribute__</tt><tt class="py-op">(</tt><tt id="link-24" class="py-name" targets="Variable Priithon.py.introspect.k=Priithon.py.introspect-module.html#k"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-24', 'k', 'link-24');">k</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L131"></a><tt class="py-lineno">131</tt>  <tt class="py-line">        <tt class="py-keyword">def</tt> <tt class="py-def-name">__str__</tt><tt class="py-op">(</tt><tt class="py-param">s</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L132"></a><tt class="py-lineno">132</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-string">"""exposureTime[sec]: %(exposureTime)s</tt> </tt>
<a name="L133"></a><tt class="py-lineno">133</tt>  <tt class="py-line"><tt class="py-string">cycleTime[sec]: %(cycleTime)s</tt> </tt>
<a name="L134"></a><tt class="py-lineno">134</tt>  <tt class="py-line"><tt class="py-string">accumulateCycles: %(accumulateCycles)s</tt> </tt>
<a name="L135"></a><tt class="py-lineno">135</tt>  <tt class="py-line"><tt class="py-string">accumulateCycleTime[sec]: %(accumulateCycleTime)s</tt> </tt>
<a name="L136"></a><tt class="py-lineno">136</tt>  <tt class="py-line"><tt class="py-string">stackCycleTime[sec]: %(stackCycleTime)s</tt> </tt>
<a name="L137"></a><tt class="py-lineno">137</tt>  <tt class="py-line"><tt class="py-string">pixelReadoutTime[sec]: %(pixelReadoutTime)s</tt> </tt>
<a name="L138"></a><tt class="py-lineno">138</tt>  <tt class="py-line"><tt class="py-string">shutterTime[sec]: %(shutterTime)s</tt> </tt>
<a name="L139"></a><tt class="py-lineno">139</tt>  <tt class="py-line"><tt class="py-string">temperature[C]: %(temperature)s\</tt> </tt>
<a name="L140"></a><tt class="py-lineno">140</tt>  <tt class="py-line"><tt class="py-string">"""</tt><tt class="py-op">%</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt> </tt>
</div></div><a name="L141"></a><tt class="py-lineno">141</tt>  <tt class="py-line">        <tt class="py-comment">#def _get_keys(s):</tt> </tt>
<a name="L142"></a><tt class="py-lineno">142</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#    return s.__dict__</tt> </tt>
<a name="L143"></a><tt class="py-lineno">143</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt id="link-25" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-25', 'info', 'link-5');">info</a></tt><tt class="py-op">=</tt> <tt class="py-name">_info</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L144"></a><tt class="py-lineno">144</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-26" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-26', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L145"></a><tt class="py-lineno">145</tt>  <tt class="py-line">    <tt id="link-27" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-27', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">temperature</tt> <tt class="py-op">=</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">5</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-comment"># int(s[5])</tt> </tt>
<a name="L146"></a><tt class="py-lineno">146</tt>  <tt class="py-line"> </tt>
<a name="L147"></a><tt class="py-lineno">147</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt><tt class="py-op">&lt;</tt><tt class="py-number">13</tt><tt class="py-op">:</tt> <tt class="py-comment"># check </tt> </tt>
<a name="L148"></a><tt class="py-lineno">148</tt>  <tt class="py-line">        <tt class="py-name">s</tt> <tt class="py-op">+=</tt> <tt class="py-op">[</tt><tt class="py-string">'hack'</tt><tt class="py-op">]</tt> <tt class="py-op">+</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-28" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-28', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L149"></a><tt class="py-lineno">149</tt>  <tt class="py-line"> </tt>
<a name="L150"></a><tt class="py-lineno">150</tt>  <tt class="py-line">    <tt id="link-29" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-29', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">exposureTime</tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">12</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L151"></a><tt class="py-lineno">151</tt>  <tt class="py-line">    <tt id="link-30" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-30', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">cycleTime</tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">13</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L152"></a><tt class="py-lineno">152</tt>  <tt class="py-line">    <tt id="link-31" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-31', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">accumulateCycleTime</tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">14</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L153"></a><tt class="py-lineno">153</tt>  <tt class="py-line">    <tt id="link-32" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-32', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">accumulateCycles</tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">15</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L154"></a><tt class="py-lineno">154</tt>  <tt class="py-line"> </tt>
<a name="L155"></a><tt class="py-lineno">155</tt>  <tt class="py-line">    <tt id="link-33" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-33', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">stackCycleTime</tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">17</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L156"></a><tt class="py-lineno">156</tt>  <tt class="py-line">    <tt id="link-34" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-34', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">pixelReadoutTime</tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">18</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L157"></a><tt class="py-lineno">157</tt>  <tt class="py-line"> </tt>
<a name="L158"></a><tt class="py-lineno">158</tt>  <tt class="py-line">    <tt id="link-35" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-35', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">gainDAC</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">21</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L159"></a><tt class="py-lineno">159</tt>  <tt class="py-line"> </tt>
<a name="L160"></a><tt class="py-lineno">160</tt>  <tt class="py-line">    <tt class="py-comment">#skip read of line --- seb: last number is length of next string</tt> </tt>
<a name="L161"></a><tt class="py-lineno">161</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># seb</tt> </tt>
<a name="L162"></a><tt class="py-lineno">162</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># sebinfo.detectorType = f.readline().rstrip()</tt> </tt>
<a name="L163"></a><tt class="py-lineno">163</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">n</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L164"></a><tt class="py-lineno">164</tt>  <tt class="py-line">    <tt id="link-36" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-36', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">detectorType</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-37" class="py-name" targets="Method Priithon.py.document.Document.read()=Priithon.py.document.Document-class.html#read"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-37', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt> </tt>
<a name="L165"></a><tt class="py-lineno">165</tt>  <tt class="py-line">    <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-38" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-38', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment"># skip rest of line</tt> </tt>
<a name="L166"></a><tt class="py-lineno">166</tt>  <tt class="py-line"> </tt>
<a name="L167"></a><tt class="py-lineno">167</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-39" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-39', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L168"></a><tt class="py-lineno">168</tt>  <tt class="py-line">    <tt id="link-40" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-40', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">detectorSize</tt><tt class="py-op">=</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L169"></a><tt class="py-lineno">169</tt>  <tt class="py-line">    <tt class="py-name">n</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L170"></a><tt class="py-lineno">170</tt>  <tt class="py-line">    <tt id="link-41" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-41', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">fileName</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-42" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-42', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt> </tt>
<a name="L171"></a><tt class="py-lineno">171</tt>  <tt class="py-line">    <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-43" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-43', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment"># skip rest of line (just a space and \n")</tt> </tt>
<a name="L172"></a><tt class="py-lineno">172</tt>  <tt class="py-line"> </tt>
<a name="L173"></a><tt class="py-lineno">173</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">_</tt> <tt class="py-keyword">in</tt> <tt id="link-44" class="py-name" targets="Method Priithon.plt.plot_objects.axis_object.range()=Priithon.plt.plot_objects.axis_object-class.html#range"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-44', 'range', 'link-44');">range</a></tt><tt class="py-op">(</tt><tt class="py-number">3</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L174"></a><tt class="py-lineno">174</tt>  <tt class="py-line">        <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-45" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-45', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment"># skip rest of line</tt> </tt>
<a name="L175"></a><tt class="py-lineno">175</tt>  <tt class="py-line"> </tt>
<a name="L176"></a><tt class="py-lineno">176</tt>  <tt class="py-line">    <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-46" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-46', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-number">14</tt><tt class="py-op">)</tt> <tt class="py-comment"># skip 14 bytes</tt> </tt>
<a name="L177"></a><tt class="py-lineno">177</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-47" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-47', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L178"></a><tt class="py-lineno">178</tt>  <tt class="py-line">    <tt id="link-48" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-48', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">shutterTime</tt><tt class="py-op">=</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">float</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L179"></a><tt class="py-lineno">179</tt>  <tt class="py-line"> </tt>
<a name="L180"></a><tt class="py-lineno">180</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">_</tt> <tt class="py-keyword">in</tt> <tt id="link-49" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-49', 'range', 'link-44');">range</a></tt><tt class="py-op">(</tt><tt class="py-number">8</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L181"></a><tt class="py-lineno">181</tt>  <tt class="py-line">        <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-50" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-50', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment"># skip rest of line</tt> </tt>
<a name="L182"></a><tt class="py-lineno">182</tt>  <tt class="py-line"> </tt>
<a name="L183"></a><tt class="py-lineno">183</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-string">'Luc'</tt> <tt class="py-op">==</tt> <tt id="link-51" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-51', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">detectorType</tt><tt class="py-op">:</tt> </tt>
<a name="L184"></a><tt class="py-lineno">184</tt>  <tt class="py-line">        <tt class="py-comment">#% Andor Luca</tt> </tt>
<a name="L185"></a><tt class="py-lineno">185</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-52" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-52', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment"># skip rest of line</tt> </tt>
<a name="L186"></a><tt class="py-lineno">186</tt>  <tt class="py-line">        <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-53" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-53', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment"># skip rest of line</tt> </tt>
<a name="L187"></a><tt class="py-lineno">187</tt>  <tt class="py-line"> </tt>
<a name="L188"></a><tt class="py-lineno">188</tt>  <tt class="py-line">    <tt class="py-comment">#print f.readline()</tt> </tt>
<a name="L189"></a><tt class="py-lineno">189</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L190"></a><tt class="py-lineno">190</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-54" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-54', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L191"></a><tt class="py-lineno">191</tt>  <tt class="py-line">    <tt class="py-name">n</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L192"></a><tt class="py-lineno">192</tt>  <tt class="py-line">    <tt id="link-55" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-55', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">frameAxis</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-56" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-56', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt> <tt class="py-comment"># "Pixel number"</tt> </tt>
<a name="L193"></a><tt class="py-lineno">193</tt>  <tt class="py-line"> </tt>
<a name="L194"></a><tt class="py-lineno">194</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-57" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-57', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L195"></a><tt class="py-lineno">195</tt>  <tt class="py-line">    <tt class="py-name">n</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L196"></a><tt class="py-lineno">196</tt>  <tt class="py-line">    <tt id="link-58" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-58', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">dataType</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-59" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-59', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt>  <tt class="py-comment"># "Counts"</tt> </tt>
<a name="L197"></a><tt class="py-lineno">197</tt>  <tt class="py-line">     </tt>
<a name="L198"></a><tt class="py-lineno">198</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-60" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-60', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L199"></a><tt class="py-lineno">199</tt>  <tt class="py-line">    <tt class="py-name">n</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L200"></a><tt class="py-lineno">200</tt>  <tt class="py-line">    <tt id="link-61" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-61', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">imageAxis</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-62" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-62', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt> <tt class="py-comment"># "Pixel number"</tt> </tt>
<a name="L201"></a><tt class="py-lineno">201</tt>  <tt class="py-line">     </tt>
<a name="L202"></a><tt class="py-lineno">202</tt>  <tt class="py-line"> </tt>
<a name="L203"></a><tt class="py-lineno">203</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-63" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-63', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L204"></a><tt class="py-lineno">204</tt>  <tt class="py-line">    <tt class="py-keyword">assert</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">65538</tt> </tt>
<a name="L205"></a><tt class="py-lineno">205</tt>  <tt class="py-line"> </tt>
<a name="L206"></a><tt class="py-lineno">206</tt>  <tt class="py-line">    <tt class="py-comment">#info.imageArea = map(int, s[1:7])</tt> </tt>
<a name="L207"></a><tt class="py-lineno">207</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">o</tt> <tt class="py-op">=</tt> <tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-number">7</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L208"></a><tt class="py-lineno">208</tt>  <tt class="py-line">    <tt id="link-64" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-64', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">imageArea</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">5</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">4</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L209"></a><tt class="py-lineno">209</tt>  <tt class="py-line">    <tt class="py-name">sizeStack</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">7</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L210"></a><tt class="py-lineno">210</tt>  <tt class="py-line">    <tt class="py-name">size2dSect</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">8</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L211"></a><tt class="py-lineno">211</tt>  <tt class="py-line">     </tt>
<a name="L212"></a><tt class="py-lineno">212</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-65" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-65', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L213"></a><tt class="py-lineno">213</tt>  <tt class="py-line">    <tt class="py-keyword">assert</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">65538</tt> </tt>
<a name="L214"></a><tt class="py-lineno">214</tt>  <tt class="py-line"> </tt>
<a name="L215"></a><tt class="py-lineno">215</tt>  <tt class="py-line">    <tt class="py-name">o</tt><tt class="py-op">=</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-number">5</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L216"></a><tt class="py-lineno">216</tt>  <tt class="py-line">    <tt id="link-66" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-66', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">frameArea</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L217"></a><tt class="py-lineno">217</tt>  <tt class="py-line">    <tt class="py-name">o</tt><tt class="py-op">=</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">5</tt><tt class="py-op">:</tt><tt class="py-number">7</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L218"></a><tt class="py-lineno">218</tt>  <tt class="py-line">    <tt id="link-67" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-67', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">frameBins</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">o</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L219"></a><tt class="py-lineno">219</tt>  <tt class="py-line"> </tt>
<a name="L220"></a><tt class="py-lineno">220</tt>  <tt class="py-line"> </tt>
<a name="L221"></a><tt class="py-lineno">221</tt>  <tt class="py-line">    <tt class="py-name">shape2d</tt><tt class="py-op">=</tt><tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-number">1</tt> <tt class="py-op">+</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">diff</tt><tt class="py-op">(</tt><tt id="link-68" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-68', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">frameArea</tt><tt class="py-op">,</tt> <tt id="link-69" class="py-name" targets="Function Priithon.plt.interface.axis()=Priithon.plt.interface-module.html#axis,Method Priithon.plt.wxplt.plot_canvas.axis()=Priithon.plt.wxplt.plot_canvas-class.html#axis"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-69', 'axis', 'link-69');">axis</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">//</tt><tt id="link-70" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-70', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">frameBins</tt><tt class="py-op">)</tt> </tt>
<a name="L222"></a><tt class="py-lineno">222</tt>  <tt class="py-line">    <tt class="py-name">nSects</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1</tt> <tt class="py-op">+</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">diff</tt><tt class="py-op">(</tt><tt id="link-71" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-71', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">imageArea</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L223"></a><tt class="py-lineno">223</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">prod</tt><tt class="py-op">(</tt><tt class="py-name">shape2d</tt><tt class="py-op">)</tt> <tt class="py-op">!=</tt> <tt class="py-name">size2dSect</tt> <tt class="py-keyword">or</tt> <tt class="py-name">size2dSect</tt><tt class="py-op">*</tt><tt class="py-name">nSects</tt> <tt class="py-op">!=</tt> <tt class="py-name">sizeStack</tt><tt class="py-op">:</tt> </tt>
<a name="L224"></a><tt class="py-lineno">224</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">IOError</tt><tt class="py-op">,</tt> <tt class="py-string">'Andor SIF: Inconsistent image header.'</tt> </tt>
<a name="L225"></a><tt class="py-lineno">225</tt>  <tt class="py-line"> </tt>
<a name="L226"></a><tt class="py-lineno">226</tt>  <tt class="py-line">    <tt class="py-name">shape3d</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">nSects</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-name">shape2d</tt> </tt>
<a name="L227"></a><tt class="py-lineno">227</tt>  <tt class="py-line"> </tt>
<a name="L228"></a><tt class="py-lineno">228</tt>  <tt class="py-line">    <tt id="link-72" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-72', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">comment_</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L229"></a><tt class="py-lineno">229</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">n</tt> <tt class="py-keyword">in</tt> <tt id="link-73" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-73', 'range', 'link-44');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">nSects</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L230"></a><tt class="py-lineno">230</tt>  <tt class="py-line">        <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-74" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-74', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L231"></a><tt class="py-lineno">231</tt>  <tt class="py-line">        <tt class="py-name">n</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L232"></a><tt class="py-lineno">232</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">n</tt><tt class="py-op">:</tt> </tt>
<a name="L233"></a><tt class="py-lineno">233</tt>  <tt class="py-line">            <tt id="link-75" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-75', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">comment_</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-76" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-76', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L234"></a><tt class="py-lineno">234</tt>  <tt class="py-line">        <tt class="py-comment">#f.readline() # skip rest of line</tt> </tt>
<a name="L235"></a><tt class="py-lineno">235</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L236"></a><tt class="py-lineno">236</tt>  <tt class="py-line"> </tt>
<a name="L237"></a><tt class="py-lineno">237</tt>  <tt class="py-line">    <tt id="link-77" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-77', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">timeStamp</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">fromfile</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint16</tt><tt class="py-op">,</tt> <tt class="py-number">2</tt><tt class="py-op">)</tt> <tt class="py-comment"># 4 bytes to be read here !!! seb</tt> </tt>
<a name="L238"></a><tt class="py-lineno">238</tt>  <tt class="py-line">    <tt class="py-comment">#qqqq = N.fromfile(f, N.uint8, 2)</tt> </tt>
<a name="L239"></a><tt class="py-lineno">239</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L240"></a><tt class="py-lineno">240</tt>  <tt class="py-line"> </tt>
<a name="L241"></a><tt class="py-lineno">241</tt>  <tt class="py-line">    <tt class="py-comment">##return U.localsAsOneObject()</tt> </tt>
<a name="L242"></a><tt class="py-lineno">242</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#info.imageData=N.fromfile(f, N.single, sizeStack) #N.prod(shape2d)*nSects) # =&gt;single'),[s z]);</tt> </tt>
<a name="L243"></a><tt class="py-lineno">243</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">##info.imageData=reshape(fread(f,prod(s)*z,'single=&gt;single'),[s z]);</tt> </tt>
<a name="L244"></a><tt class="py-lineno">244</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#info.imageData.shape = shape3d</tt> </tt>
<a name="L245"></a><tt class="py-lineno">245</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L246"></a><tt class="py-lineno">246</tt>  <tt class="py-line">    <tt class="py-comment">#just save file-position, numberOfPixels, shape</tt> </tt>
<a name="L247"></a><tt class="py-lineno">247</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#then seek for now,  reopen with memmap later</tt> </tt>
<a name="L248"></a><tt class="py-lineno">248</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt id="link-78" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-78', 'info', 'link-5');">info</a></tt><tt class="py-op">.</tt><tt class="py-name">imageData</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">tell</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">sizeStack</tt><tt class="py-op">,</tt> <tt class="py-name">shape3d</tt><tt class="py-op">)</tt> </tt>
<a name="L249"></a><tt class="py-lineno">249</tt>  <tt class="py-line">    <tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">sizeStack</tt><tt class="py-op">*</tt><tt class="py-number">4</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L250"></a><tt class="py-lineno">250</tt>  <tt class="py-line"> </tt>
<a name="L251"></a><tt class="py-lineno">251</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-79" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-79', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L252"></a><tt class="py-lineno">252</tt>  <tt class="py-line">    <tt class="py-name">n</tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L253"></a><tt class="py-lineno">253</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">n</tt><tt class="py-op">:</tt> </tt>
<a name="L254"></a><tt class="py-lineno">254</tt>  <tt class="py-line">        <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-80" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-80', 'read', 'link-37');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt> </tt>
<a name="L255"></a><tt class="py-lineno">255</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt> <tt class="py-name">s</tt>  <tt class="py-comment"># ???</tt> </tt>
<a name="L256"></a><tt class="py-lineno">256</tt>  <tt class="py-line"> </tt>
<a name="L257"></a><tt class="py-lineno">257</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt id="link-81" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.readline
Priithon.py.pseudo.PseudoFile.readline
Priithon.py.shell.Shell.readline" class="py-name" href="#" onclick="return doclink('link-81', 'readline', 'link-11');">readline</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L258"></a><tt class="py-lineno">258</tt>  <tt class="py-line">    <tt class="py-name">next</tt> <tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L259"></a><tt class="py-lineno">259</tt>  <tt class="py-line">    <tt class="py-comment">#o=readString(f);           % ???</tt> </tt>
<a name="L260"></a><tt class="py-lineno">260</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#if numel(o)</tt> </tt>
<a name="L261"></a><tt class="py-lineno">261</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#   fprintf('%s\n',o);      % ???</tt> </tt>
<a name="L262"></a><tt class="py-lineno">262</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#end</tt> </tt>
<a name="L263"></a><tt class="py-lineno">263</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#next=fscanf(f,'%d',1);</tt> </tt>
<a name="L264"></a><tt class="py-lineno">264</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L265"></a><tt class="py-lineno">265</tt>  <tt class="py-line"> </tt>
<a name="L266"></a><tt class="py-lineno">266</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-82" class="py-name"><a title="Priithon.Mrc.Mrc.info
Priithon.Mrc.Mrc2.info" class="py-name" href="#" onclick="return doclink('link-82', 'info', 'link-5');">info</a></tt><tt class="py-op">,</tt> <tt class="py-name">next</tt> </tt>
<a name="L267"></a><tt class="py-lineno">267</tt>  <tt class="py-line">    <tt class="py-string">'''</tt> </tt>
<a name="L268"></a><tt class="py-lineno">268</tt>  <tt class="py-line"><tt class="py-string">    #offset 0</tt> </tt>
<a name="L269"></a><tt class="py-lineno">269</tt>  <tt class="py-line"><tt class="py-string">    o=fscanf(f,'%d',6);</tt> </tt>
<a name="L270"></a><tt class="py-lineno">270</tt>  <tt class="py-line"><tt class="py-string">    info.temperature=o(6);</tt> </tt>
<a name="L271"></a><tt class="py-lineno">271</tt>  <tt class="py-line"><tt class="py-string">    skipBytes(f,10);</tt> </tt>
<a name="L272"></a><tt class="py-lineno">272</tt>  <tt class="py-line"><tt class="py-string">    o=fscanf(f,'%f',5);</tt> </tt>
<a name="L273"></a><tt class="py-lineno">273</tt>  <tt class="py-line"><tt class="py-string">    info.exposureTime=o(2);</tt> </tt>
<a name="L274"></a><tt class="py-lineno">274</tt>  <tt class="py-line"><tt class="py-string">    info.cycleTime=o(3);</tt> </tt>
<a name="L275"></a><tt class="py-lineno">275</tt>  <tt class="py-line"><tt class="py-string">    info.accumulateCycleTime=o(4);</tt> </tt>
<a name="L276"></a><tt class="py-lineno">276</tt>  <tt class="py-line"><tt class="py-string">    info.accumulateCycles=o(5);</tt> </tt>
<a name="L277"></a><tt class="py-lineno">277</tt>  <tt class="py-line"><tt class="py-string">    skipBytes(f,2);</tt> </tt>
<a name="L278"></a><tt class="py-lineno">278</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L279"></a><tt class="py-lineno">279</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L280"></a><tt class="py-lineno">280</tt>  <tt class="py-line"><tt class="py-string">    o=fscanf(f,'%f',2);</tt> </tt>
<a name="L281"></a><tt class="py-lineno">281</tt>  <tt class="py-line"><tt class="py-string">    info.stackCycleTime=o(1);</tt> </tt>
<a name="L282"></a><tt class="py-lineno">282</tt>  <tt class="py-line"><tt class="py-string">    info.pixelReadoutTime=o(2);</tt> </tt>
<a name="L283"></a><tt class="py-lineno">283</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L284"></a><tt class="py-lineno">284</tt>  <tt class="py-line"><tt class="py-string">    o=fscanf(f,'%d',3);</tt> </tt>
<a name="L285"></a><tt class="py-lineno">285</tt>  <tt class="py-line"><tt class="py-string">    info.gainDAC=o(3);</tt> </tt>
<a name="L286"></a><tt class="py-lineno">286</tt>  <tt class="py-line"><tt class="py-string">    skipLines(f,1);</tt> </tt>
<a name="L287"></a><tt class="py-lineno">287</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L288"></a><tt class="py-lineno">288</tt>  <tt class="py-line"><tt class="py-string">    info.detectorType=readLine(f);</tt> </tt>
<a name="L289"></a><tt class="py-lineno">289</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L290"></a><tt class="py-lineno">290</tt>  <tt class="py-line"><tt class="py-string">    info.detectorSize=fscanf(f,'%d',[1 2]);</tt> </tt>
<a name="L291"></a><tt class="py-lineno">291</tt>  <tt class="py-line"><tt class="py-string">    info.fileName=readString(f);</tt> </tt>
<a name="L292"></a><tt class="py-lineno">292</tt>  <tt class="py-line"><tt class="py-string">    skipLines(f,3);</tt> </tt>
<a name="L293"></a><tt class="py-lineno">293</tt>  <tt class="py-line"><tt class="py-string">    skipBytes(f,14);</tt> </tt>
<a name="L294"></a><tt class="py-lineno">294</tt>  <tt class="py-line"><tt class="py-string">    info.shutterTime=fscanf(f,'%f',[1 2]);</tt> </tt>
<a name="L295"></a><tt class="py-lineno">295</tt>  <tt class="py-line"><tt class="py-string">    skipLines(f,8);</tt> </tt>
<a name="L296"></a><tt class="py-lineno">296</tt>  <tt class="py-line"><tt class="py-string">    if strmatch('Luc',info.detectorType)</tt> </tt>
<a name="L297"></a><tt class="py-lineno">297</tt>  <tt class="py-line"><tt class="py-string">       skipLines(f,2);                       % Andor Luca</tt> </tt>
<a name="L298"></a><tt class="py-lineno">298</tt>  <tt class="py-line"><tt class="py-string">    end</tt> </tt>
<a name="L299"></a><tt class="py-lineno">299</tt>  <tt class="py-line"><tt class="py-string">    info.frameAxis=readString(f);</tt> </tt>
<a name="L300"></a><tt class="py-lineno">300</tt>  <tt class="py-line"><tt class="py-string">    info.dataType=readString(f);</tt> </tt>
<a name="L301"></a><tt class="py-lineno">301</tt>  <tt class="py-line"><tt class="py-string">    info.imageAxis=readString(f);</tt> </tt>
<a name="L302"></a><tt class="py-lineno">302</tt>  <tt class="py-line"><tt class="py-string">    o=fscanf(f,'65538 %d %d %d %d %d %d %d %d 65538 %d %d %d %d %d %d',14);</tt> </tt>
<a name="L303"></a><tt class="py-lineno">303</tt>  <tt class="py-line"><tt class="py-string">    info.imageArea=[o(1) o(4) o(6);o(3) o(2) o(5)];</tt> </tt>
<a name="L304"></a><tt class="py-lineno">304</tt>  <tt class="py-line"><tt class="py-string">    info.frameArea=[o(9) o(12);o(11) o(10)];</tt> </tt>
<a name="L305"></a><tt class="py-lineno">305</tt>  <tt class="py-line"><tt class="py-string">    info.frameBins=[o(14) o(13)];</tt> </tt>
<a name="L306"></a><tt class="py-lineno">306</tt>  <tt class="py-line"><tt class="py-string">    s=(1 + diff(info.frameArea))./info.frameBins;</tt> </tt>
<a name="L307"></a><tt class="py-lineno">307</tt>  <tt class="py-line"><tt class="py-string">    z=1 + diff(info.imageArea(5:6));</tt> </tt>
<a name="L308"></a><tt class="py-lineno">308</tt>  <tt class="py-line"><tt class="py-string">    if prod(s) ~= o(8) | o(8)*z ~= o(7)</tt> </tt>
<a name="L309"></a><tt class="py-lineno">309</tt>  <tt class="py-line"><tt class="py-string">       fclose(f);</tt> </tt>
<a name="L310"></a><tt class="py-lineno">310</tt>  <tt class="py-line"><tt class="py-string">       error('Inconsistent image header.');</tt> </tt>
<a name="L311"></a><tt class="py-lineno">311</tt>  <tt class="py-line"><tt class="py-string">    end</tt> </tt>
<a name="L312"></a><tt class="py-lineno">312</tt>  <tt class="py-line"><tt class="py-string">    for n=1:z</tt> </tt>
<a name="L313"></a><tt class="py-lineno">313</tt>  <tt class="py-line"><tt class="py-string">       o=readString(f);</tt> </tt>
<a name="L314"></a><tt class="py-lineno">314</tt>  <tt class="py-line"><tt class="py-string">       if numel(o)</tt> </tt>
<a name="L315"></a><tt class="py-lineno">315</tt>  <tt class="py-line"><tt class="py-string">          fprintf('%s\n',o);      % comments</tt> </tt>
<a name="L316"></a><tt class="py-lineno">316</tt>  <tt class="py-line"><tt class="py-string">       end</tt> </tt>
<a name="L317"></a><tt class="py-lineno">317</tt>  <tt class="py-line"><tt class="py-string">    end</tt> </tt>
<a name="L318"></a><tt class="py-lineno">318</tt>  <tt class="py-line"><tt class="py-string">    info.timeStamp=fread(f,1,'uint16');</tt> </tt>
<a name="L319"></a><tt class="py-lineno">319</tt>  <tt class="py-line"><tt class="py-string">    info.imageData=reshape(fread(f,prod(s)*z,'single=&gt;single'),[s z]);</tt> </tt>
<a name="L320"></a><tt class="py-lineno">320</tt>  <tt class="py-line"><tt class="py-string">    o=readString(f);           % ???</tt> </tt>
<a name="L321"></a><tt class="py-lineno">321</tt>  <tt class="py-line"><tt class="py-string">    if numel(o)</tt> </tt>
<a name="L322"></a><tt class="py-lineno">322</tt>  <tt class="py-line"><tt class="py-string">       fprintf('%s\n',o);      % ???</tt> </tt>
<a name="L323"></a><tt class="py-lineno">323</tt>  <tt class="py-line"><tt class="py-string">    end</tt> </tt>
<a name="L324"></a><tt class="py-lineno">324</tt>  <tt class="py-line"><tt class="py-string">    next=fscanf(f,'%d',1);</tt> </tt>
<a name="L325"></a><tt class="py-lineno">325</tt>  <tt class="py-line"><tt class="py-string">    '''</tt> </tt>
</div><a name="L326"></a><tt class="py-lineno">326</tt>  <tt class="py-line"> </tt><script type="text/javascript">
<!--
expandto(location.href);
// -->
</script>
</pre>
<br />
<!-- ==================== NAVIGATION BAR ==================== -->
<table class="navbar" border="0" width="100%" cellpadding="0"
       bgcolor="#a0c0ff" cellspacing="0">
  <tr valign="middle">
  <!-- Home link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="Priithon-module.html">Home</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Tree link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="module-tree.html">Trees</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Index link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="identifier-index.html">Indices</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Help link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="help.html">Help</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Project homepage -->
      <th class="navbar" align="right" width="100%">
        <table border="0" cellpadding="0" cellspacing="0">
          <tr><th class="navbar" align="center"
            ><a class="navbar" target="_top" href="http://code.google.com/p/priithon">Priithon</a></th>
          </tr></table></th>
  </tr>
</table>
<table border="0" cellpadding="0" cellspacing="0" width="100%%">
  <tr>
    <td align="left" class="footer">
    Generated by Epydoc 3.0.1 on Mon Nov 22 14:59:50 2010
    </td>
    <td align="right" class="footer">
      <a target="mainFrame" href="http://epydoc.sourceforge.net"
        >http://epydoc.sourceforge.net</a>
    </td>
  </tr>
</table>

<script type="text/javascript">
  <!--
  // Private objects are initially displayed (because if
  // javascript is turned off then we want them to be
  // visible); but by default, we want to hide them.  So hide
  // them unless we have a cookie that says to show them.
  checkCookie();
  // -->
</script>
</body>
</html>
